Spotcaliper: Fast Wavelet-Based Spot Detection With Accurate Size Estimation

Abstract

Motivation: SpotCaliper is a novel wavelet-based image-analysis software providing a fast automatic detection scheme for circular patterns (spots), combined with the precise estimation of their size. It is implemented as an ImageJ plugin with a friendly user interface. The user is allowed to edit the results by modifying the measurements (in a semi-automated way), extract data for further analysis. The fine tuning of the detections includes the possibility of adjusting or removing the original detections, as well as adding further spots. Results: The main advantage of the software is its ability to capture the size of spots in a fast and accurate way.

Publication Date

4-15-2016

Publication Title

Bioinformatics

Volume

32

Issue

8

Number of Pages

1278-1280

Document Type

Article

Personal Identifier

scopus

DOI Link

https://doi.org/10.1093/bioinformatics/btv728

Socpus ID

84966691936 (Scopus)

Source API URL

https://api.elsevier.com/content/abstract/scopus_id/84966691936

This document is currently not available here.

Share

COinS